I've tried to find out as well. My Nook HD+ is rooted and I can see most everything on my Nook but I still haven't had any luck locating where my purchased titles are stored. The easiest way that I have found to backup my ebooks is to install the Nook for PC application. Once I download my books to that, it's an easy step to pull them into Calibre and do what I want with them.
- Byron
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