Are you looking at the file system with Windows Explorer. I'm recall one popular 3rd party file manager would get 'persistent ghosts' into its mindset.
Quote:
Originally Posted by AnotherCat
If wanted to try it is at http://emptyloop.com/unlocker/ . To use just highlight the troublesome folder in Explorer, right click, select Unlocker and follow the instructions to delete. It is safe to use.
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If unlocker doesn't delete immediate or offer a delete on reboot option, try booting in to Safe Mode and deleting there
Maybe worth running a chkdsk on the drive
BR