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Originally Posted by patrik
Hmm, I'm not sure really. When I do the highlight it may or may not cross a paragraph. What happens is that it all suddenly looks highlighted.
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The problem I have seen is for sentences in the same paragraph. If the highlight covers part of the first or last sentence and any other in the same paragraph, I see what you described. Its a fault in how the kepub was generated and in how the reader app handles the highlighting.
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Are the annotations/highlights for a book kept in Kobos own database? Shouldn't it be clean uped if a book is deleted? It doesn't. If I delete the book and then add it again, all annotations (including the errornous highlighting) is still there.
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Yes and no. Annotations are stored in the internal database. But, for epubs on the main memory, they are also written to a file. This file is read when the epub is opened and replaces whatever is in the database. I am pretty sure the database is cleaned up up when the book is deleted, but I haven't checked recently. The file is left behind, so putting an epub on again with exactly the same path will reuse it.
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Also, it seems that after I disabled the exended driver, removed the book, and then added it and sent it to the device, it still looks like "kepub" with the features only in kepub.
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I see Peter got you sorted out on that one. I suspect he knew the answer from experience. I know I've fallen for it a few times.
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Where can I read up on how Kobos database works?
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In far to many of my posts

I've been playing with the database for a year or so as I updated the driver in calibre and wrote my utilities plugin. The code for both of those will give you some hints. There are a few notes in them, but not many. And as the posts show, I'm always willing to discuss it.