Question, do you mean it is the last page in the reading order, or the last page in the TOC (Nav Doc)?
If it's the last page in the reading order, and InDesign is being touch, I would suggest going and updating the spine section of the Package Document (.opf) file to move it where you want it to be.
Otherwise (assuming that it's exporting in the NavDocument), going and fixing the Nav Doc (it's html) will fix it for you.
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