You have gotten confused between jailbreak and jbpatch.
The jailbreak will not cause any problem.
Because you removed the jailbreak, you need to rejailbreak before uninstalling jbpatch:
1)Install jailbreak
2)Use uninstaller from jbpatch
3)Install 5.3.2
If you have any problems, use this
https://www.mobileread.com/forums/sho...d.php?t=206064, jailbreak (NOT JBPATCH!!!), and update to 5.3.2
ALSO: The "howto" prefix is not for questions, but for those posts where you tell someone how to do something