I did some testing on my computer.
Ubuntu 12.04, AMD FX-8120, 16 GB, 2TB SATA II 5400rpm WD20EARS. Ext4, ~60% used. /tmp in tempfs (RAM). Also SATA II SSD, but that was not used in this test.
I made 10 copies, with different titles, of a 380MB PDF.
Bulkchange author in Calibre:
First run, empty caches: 125 seconds.
Second run: 75 seconds.
Copy the books using Nautilus (default file manager in Ubuntu):
First run, empty caches: 120 seconds.
Second run: 35 seconds!
So caches and available memory seems to have a big impact.
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