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Copy and paste from Calibre Library folder to different folder on your computer or to USB connected drive will work
I often use my e-reader to transfer books to a different computer running Calibre. If needed run welcome wizard in calibre preferences for the e-reader your connecting. After Calibre is finished listing books on device and storage card A.
(All of my side loaded books are on SD Card) so I select Storage Card A from Calibre's Icon menu bar.
On book list menu click on "In Library" column header.
Now I use control select or shift select to select books for transfer.
Next with curser over selections press right mouse button brings up menu. Select add to library.
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