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I used calibre to convert from pdf to epub. I then manually unzipped and edited outside of calibre. I used kompozor to edit the individual html files and then used xp's zip to put back into a zip file. Wasn't aware that I could do all that from within calibre.
So it could be using an external zip program messed it up? I thought that as long as I didn't mess with file names, the structure would be safe.
This whole epub structure thing has somewhat of a learning curve, but, I'm jumping in anyway.
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