What I would do to track down problem.
Run check library again in case you have managed to fix the problem.
Make a new library and add several books and check library
If new library works, copy old library to a different directory switch to copied library and run check.
By copying the library you should get an error message if there is a file that is not copyable for whatever reason. Might help.
Other things but that is a start. And never hurts to have an extra backup.
Helen
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