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yes, you need 2 primary partition on the eternal sd.
In linux, start cfdisk /dev/sd* (i.e. /dev/sda, /dev/sdb...) under root (sudo su or su)
Make sure you're modifying your sd and not your hard drive.
delete all partitions and make 2 partitions as eplained in the wiki.
Change the type to modify to linux and w95 fat32.
write to disk and exit. Format your partition with mkfs.vfat and mkfs.ext3
WARNING: using cfdisk the wrong way, you can destroy you hard drive.. you're warned
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