Not automatic.
You could create an 'Empty Book' and make notes in the comments section.
It is a nice idea. But...
The Can of Worms, this idea opens

Send to Device: Duplicates file with different name or broken
Save to Disk: Duplicates file with different name or broken
Series: (No clue how bad

this gets)
Library management: What dos Calibre have to do if you delete the parent (the real file)
and probably a dozen more