I had the Factory Reset happen to me last night for no discernible reason. I had loaded up books stored on Calibre on Thursday and had been reading one on and off during the next couple of days. I had done the appropriate Eject for the Kobo using the icon on the desktop of the Mac. I have now loaded it up again and so far, so good.
Let's hope the next update can address this, as it could get a bit annoying having to keep on loading back the books, even though each one goes on quickly.
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