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Nowdays, with tex\latex compilators usually available, Kile, Mktex etc., you can create pdf, ps, dvi, html, and maybe doc files (if i remember correctly). I have never seen a function that allow you compile a document in epub format.
Besides in scientific community a large amount of books are now in Djvu format... and this is the main reason for my choice of a PB e-reader.
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