I had this problem with a couple epubs and I fixed it using Calibre. You just have to convert it from epub to... epub! Kind of weird to "convert" it to the same format but it did work for me. I think the problem is that the epub is made up of a bunch of smaller files (html?) and if they are too big, it causes the reader to choke. Calibre seems to fix this automatically when it does a conversion.
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