As an educator most of my reads are for reference and so I make a lot of notes and highlights. I use Kindle for Mac and the iPad Kindle app. When done with a book on the iPad I copy the .mbp file from the iPad back to the Kindle for Mac library via the Kindle app in iTunes.
When the mobi file is opened from calibre the .mobi file is copied from calibre lib to kindle lib if it isn't there and so the mobi file so the mpb file need always be current in the Kindle Lib.
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