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My concern is that the plugin has modified the collection file in a way that confuse Calibre.
So if you add a book to a collection manually on the kindle, then connect and go to Device View - do you see that collection?
Oh, on the import to custom column - based on some simple tests and borrowed code from kiwidude, it looks like its fairly easy to do. Could be a bit dangerous as it will replace everything in the custom column.
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