Seems very unlikely that I've got a solution to a tech problem, being the resident tech idiot - but have you tried Calibre ?
(Unless these PDFs are some specialized type, that isn't compatible, that is.)
I've just loaded a PDF on my PRS through Calibre easily, to my surprise, see thread ......
" From PDF to ePub
HopelessManu (02-11-2011) "
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