@KevinH,
The source code for the command line is on sourceforge, and there is a link to the source code on the original post. I haven't put the Java code out there, because the building procedure is so different for the Mac and Windows platform. But all the logic is in the command line, so you can just replace the command line program with the source that is available that the GUI is using (though this doesn't allow you to change the GUI, I realize).
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