Thanks for posting that info, Sam. I think the problems you're encountering are because of how you're saving off the Word file to HTML. You want to save as "Web Page, Filtered" - that will minimise the MS-proprietary stuff that goes into the HTML file. All of those XML files (colorschememapping, themedata, filelist, etc) are MS proprietary format files - in fact I think those are files that form part of the .docx XML format. They shouldn't be forming any part of the EPUB.
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