Backing up a minute. For those books that do have a blank line between paragraphs -- like those from Project Gutenberg -- I suggest you try Stingo's Word Macro (available through the MobileRead Wiki, link on the top left of this page.) I use it for preprocessing files before I load them into BD. Many of the other files could be converted to this standard form.
While BD is good, I have found it far better to do major editing outside the program rather than inside the program. Other disagree. Yur mileage may vary.
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