I have a similar problem with my LDS edition of the scriptures from ldspocket.com. The navigation features that were available in the Palm and Desktop versions of the mobipocket reader do not appear to be implemented in the Gen3 reader. I sent an email to Bookeen support asking about the missing reader features. In particular, it seems that javascript support (used for dropdown navigation boxes) and inter-document linking are not supported. Intra-document hypertext links do seem to work, however. Those make a barely workable navigation system with "book" links at the beginning of, for example, the Old Testament, chapter links at the top of each book, and verse links at the front of each chapter. (I did have to put a bookmark at the "books" list so I could easily skip past the front matter.) But I am missing all of the in-verse links to topical guide, bible dictionary, scripture index, maps, etc.
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