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Yes and no. You will be able to use Calibre to upload and manage your collections in Linux, but ADE is required for a lot of the DRM protected files, in general. You can, however, use Wine to emulate windows and run ADE from there, I believe, if you wish to purchase DRM books. I have not done it myself, though, the only reason I know any of this is because I was trying to fix a Kobo book I bought and was trying to use my Linux box at work to update it, but could not since it was a DRM book.
Someone else may be able to shed more light on it, though.
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