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Database integrity check doesn't move above 0% AFAIK until it finishes. Then it either gives you an error message or exits without message which I have assumed means it passed?
The newer database check for potential problems is very fast but don't know if it would help.
I would try installing an earlier version and see if that works or going to a backup with the version you are using now and see if that works.
On one occasion when my database integrity failed, I moved the library (using calibre)and it passed but no idea why.
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