0.5.9 is the beta version of 0.6.
I'm not fully understanding what you are seeing, but when I get home from work, I'll load it up and see if I can understand the issue.
I will point out though, you have an awful lot of additional code that is unneccesary in the xhtml files. You could move the styles into a css file, and what looks like metadata is not needed in there, you could add it with the metadata editor or add it directly to the opf.
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