I have Snowflake Pro which isn't cheap but it works. I got it during the original release period when it was just $20.00 Now it's about $100.00 but on occasion the author has had it down to half that if you have purchased the Dummies book that he wrote with another author through amazon and such. Another thing that's good for organization is Tiddlywiki. It's a wiki file that you can use to create links to different parts of the document. It's also portable so you can have it on a flash drive to take with you rather than having to lug a computer around everywhere.
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