The book & collection lists are limited to Sony detected books.
I may add in reading calibre metadata, but I'm beginning to think it's too much trouble)
I believe that the Sony software scans the storage space for all books (that it recognises) and adds them to it's databases. I haven't done any investigation into whether it looks in all folders or only the Sony_Reader ones.
Also, I don't know which formats it supports. I only use epub, and that works okay.
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