I also wanted to perform a bulk conversion of CBRs to read on my Nook color but I started experimenting with a manual conversion of CBR to CBZ.
The problem is, when I tried to send the created CBZ to my Nook via calibre it will force the "auto-convert" option and then it takes over 5min to convert the CBZ to epub.
I think I should file a bug, even though I don't mind managing my comics with no help from calibre.
I will wait for next version though (I'm still with 0.9.2)
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