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I would suggest avoiding PDF as your intermediate format, because it is not designed to be able to convert well to other formats. As a general rule, you should only try to convert from PDF if you can't get the document in any other format.
Of the file formats that you mentioned you tried, HTML is probably your best intermediate format. If you could tell us what is not working when you try to import and convert from HTML, we might be able to help you with that easier than with your PDF problems.
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