I really don't know if sitescooper will easily work with Jpluck. It might, but you would probably have to change the path to something else. I installed Jpluck once and I really didn't like it, but I don't recall having any problems with using both it and Plucker Desktop, so perhaps the best solution would be to get Plucker Desktop just for the benefit of sitescooper. Does jpluck work with non-PDA friendly sites?
P.S. It must be hot in Atlanta at the moment!