Cannot do this. Anything that uses 'subscription' tag can't be sorted into collections. And if it doesn't have a 'subscription' tag then it can't take advantage of the nice 'articles' formatting that subscriptions have. Possibly you could modify the calibre recipe to use the usual mobi 'ebook' format but it is not a tradeoff that I'd make.
They will, however, go into the 'Periodicals: Back Issues' folder when a new issue lands on your Kindle, so there will be at most one issue on your home screen.